CDS

Accession Number TCMCG006C44412
gbkey CDS
Protein Id XP_013739078.1
Location join(13139512..13139592,13139895..13140021,13140103..13140218,13140310..13140357,13140448..13140612,13140943..13141101,13141199..13143079,13143173..13143348,13143450..13143525,13143627..13143754,13143932..13144089,13144314..13144588,13144682..13144855,13144998..13145021)
Gene LOC106441872
GeneID 106441872
Organism Brassica napus

Protein

Length 1195aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA293435
db_source XM_013883624.2
Definition DNA-directed RNA polymerase V subunit 1-like [Brassica napus]

EGGNOG-MAPPER Annotation

COG_category K
Description DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE br01611        [VIEW IN KEGG]
ko00000        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko03021        [VIEW IN KEGG]
KEGG_ko ko:K16251        [VIEW IN KEGG]
EC 2.7.7.6        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway -
GOs GO:0000419        [VIEW IN EMBL-EBI]
GO:0000428        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0003899        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005654        [VIEW IN EMBL-EBI]
GO:0005666        [VIEW IN EMBL-EBI]
GO:0005730        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006259        [VIEW IN EMBL-EBI]
GO:0006304        [VIEW IN EMBL-EBI]
GO:0006305        [VIEW IN EMBL-EBI]
GO:0006306        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0006952        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009058        [VIEW IN EMBL-EBI]
GO:0009059        [VIEW IN EMBL-EBI]
GO:0009605        [VIEW IN EMBL-EBI]
GO:0009607        [VIEW IN EMBL-EBI]
GO:0009620        [VIEW IN EMBL-EBI]
GO:0009892        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010033        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010605        [VIEW IN EMBL-EBI]
GO:0010608        [VIEW IN EMBL-EBI]
GO:0010629        [VIEW IN EMBL-EBI]
GO:0014070        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016246        [VIEW IN EMBL-EBI]
GO:0016441        [VIEW IN EMBL-EBI]
GO:0016458        [VIEW IN EMBL-EBI]
GO:0016604        [VIEW IN EMBL-EBI]
GO:0016740        [VIEW IN EMBL-EBI]
GO:0016772        [VIEW IN EMBL-EBI]
GO:0016779        [VIEW IN EMBL-EBI]
GO:0018130        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0019438        [VIEW IN EMBL-EBI]
GO:0030422        [VIEW IN EMBL-EBI]
GO:0030880        [VIEW IN EMBL-EBI]
GO:0031047        [VIEW IN EMBL-EBI]
GO:0031050        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032259        [VIEW IN EMBL-EBI]
GO:0032774        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0034062        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034654        [VIEW IN EMBL-EBI]
GO:0035194        [VIEW IN EMBL-EBI]
GO:0040029        [VIEW IN EMBL-EBI]
GO:0042221        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043207        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0043331        [VIEW IN EMBL-EBI]
GO:0043412        [VIEW IN EMBL-EBI]
GO:0043414        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044249        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044271        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044451        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0044728        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0048519        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050832        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051704        [VIEW IN EMBL-EBI]
GO:0051707        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0055029        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0061695        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0070887        [VIEW IN EMBL-EBI]
GO:0070918        [VIEW IN EMBL-EBI]
GO:0071310        [VIEW IN EMBL-EBI]
GO:0071359        [VIEW IN EMBL-EBI]
GO:0071407        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0097747        [VIEW IN EMBL-EBI]
GO:0098542        [VIEW IN EMBL-EBI]
GO:0140098        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901362        [VIEW IN EMBL-EBI]
GO:1901576        [VIEW IN EMBL-EBI]
GO:1901698        [VIEW IN EMBL-EBI]
GO:1901699        [VIEW IN EMBL-EBI]
GO:1902494        [VIEW IN EMBL-EBI]
GO:1990234        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGAAGAAGCGTCTTCCTCAGATATTCTAGAAGCAGAGATTGTTGGAATCTCATTCGCTCTTGCTACTCATCGTCAGATCCGTCTAGCATCCATTAGTGACGCTGGGATCAACCATGCTAGCCAACTCTCTAACGCATTCTTGGGGTTACCTCTGGAGTTTGGTAAATGTGAAGCTTGCGGTGCCACTGAGCCTGATAAATGTGAAGGTCATTTTGGGTATATACATCTGCCAGTGCCTATATACCATCCCGCTCATGTTAGTGAGTTGAAACAGATGCTGAGCCTTCTCTGCTTGAAGTGTCTCAAGATAAAGAAGATTAAGAGCACAAGTTCTGGGCTTGCGGAGCGCTTACTAGGCGTCTGTTGTGAGGAAGCTTCGAACATCACAATTAAAGATAAATCATCAGATGGTGCCTCATATCTTCAACTGAAGCTCCCATCTAGAACAAGACTTCAGGAAGGCTTCTGGAATTTCCTGGAAAGATACGGTTACCGCTATGGAAGCGACCATACCCGGCCCCTGCTAGCAAGAGAGGTAAAGGAAATTTTAAGACGGATTCCTGAAGAGACAAGAAAGAAGCTCACAGCAAAGGGACATATTCCTCAAGAAGGATACATCTTAGAGTATCTTCCAGTCCCGCCTAACTGTCTGTCAGTGCCAGAAGTTTCTGATGGTTCCAACTCCATGTCAGTGGATCCGTCTAGAATCGAGCTAAAAGACGTTCTCAGGAAAGTGGTAGCGATCAACAACTCTAGGTCTGGTGAGACGAACTTTGAGTCGCATAGAGCTGAAGCCAATGAAATGTTTAGAGTGGTGGATACCTATCTTCAGGTGAGGGGTACTGCAAAGCCAACAAGAAACATTGACATGAGATTCGGGGTGTCCAAGATCTCGGACAGTTCCTCCTCAAAAGCTTGGACAGAAAAGATGAGAACACTTTTCATTCGGAAAGGTTCAGGCTTCTCTTCTCGCAGCGTCATCACTGGAGATGCCTTCAGGAATGTGAATGAGGTGGGGATCCCTATGGAAATTGCACATCGGATCACATTTGAGGAGAGAGTTAGCGTCCACAACATTGGATATCTACAAGAGTTGGTGGACAACAAGATGTGCTTAAGCTATACCCAAGGTTCTACTACCTATTCTCTGAGGGACGGTTCCAAGGGGCATACAGTCCTTAAACCCGGGCAGATTGTGCATCGCAGGGTCATGGATGGAGATGTTGTGTTTATCAACCGTCCTCCCACAACACATAAGCATTCTCTGCAAGCACTTCGAGTGTATGTTCATGAAGACAACACGGTGAAGATCAATCCCCTGATGTGTAGCCCTCTCAGTGCTGATTTTGATGGTGATTGTGTCCATCTGTTCTACCCCCAGTCTCTCACAGCTAAGGCAGAGGTACTGGAGCTCTTTTCAGTGGATAAGCAACTTCGCAGCTCACATACTGGGCAGCTGATTCTGCAGCTGGGTTTGGATTCTTTGCTGTCTCTGAGGGTTATGATGGAGCAGGTGTTTTTGGACAAAGCATCTGCTCAACAGTTAGCTATGTATGGCTCTCGATCTCTCCCACCACCAGCTGTAGTGAAGTCCAGTAAATCTGGCCCGGCTTGGACATTTTTCCAGATATTGCAGCTTGCCTTTCCTGAGCGTCTTAGTTGCAGAGGGGACGGGTTCATAGTTGGTGGAAGTGATTTGCTGTCCTTTGATTTTGGGGTTGATGCGTTGGCGTCTATAATCAATGGAATTGTAACCGCAATCATGGTGGAGAAGGGTCCAAAGGAAGCACTGGCATTCTTTGATTCACTGCAGCCGCTACTGATGGAACATCTAGATCCTCAGGGATTTAGTTTAAGTCTGGAAGACTTGTCCATGTCTAGGGAAGACATGGGAGTTATTCACAATCTCATCGTCCGGGAGATTTCTCCTATGGTGTCTAGGTTGAGGTTATCGTATGAGGACGAACTCCAACTAGAGAACAGCATCCAGAAAGTGAAGGAAGTGGCTGCTAATTTCATGCTGAAGTCGTATTCGATGAGGAACTTGATCGACATCAAGAGCAACTCAGCAATAAACAAGCTGGTGCAGCAGATTGGCTTCCTGGGTCTTCAGCTTTCAGACAAGAAGAAGTTGTACACGAAGACTCTGGTGGAAGACATGGCTCAGTTTTATAAGAAAAAGTATGTCAGTACTTCTTCCTCTGGAGATTTTGGAATTGTGAAGGGCTGCTTTTTTCACGGACTTGATCCTTATGAAGAGATGGCTCATTCAGTTGCGGCAAGGGAGGTAATTGTCCGCTCTTCAAGGGGATTAGCTGAGCCTGGTACACTCTTCAAGAATCTGATGGCTGTTCTGCGAGACATAGTCATTACCAACGATGGAACTGTAAGAAATACATGCAGTAACTCCATCGTGCAGTTCAAGTATGAGCTGAGTTCTGACAATGAGAATCAAGGTTTATTTGAAGCGGGAGACCCTGTTGGAGTATTGGCAGCAACCGCCATGTCAAATCCCGCCTATAAAGCGGTGCTTGATTCTTCCCCAAATAGCAACTCTTCATGGGAACTAATGAAGGAAGTTCTACTCTGCAAAGTCAACTTCCAGAACACCACCAATGATCGGCGCGTGATTCTTTATCTGAATGAATGCCGCTGTGGGAAAAAGTACTGCCAGGAGAATTCTGCTTACACAGTTAGGAACAAGCTGAAGAAAGTTAGTCTGAAAGATACTGCAGTGGAGTTTCTAGTCGAATACAGAAAGCAACAAGCGATTTCAGAAATTTTTGGAATGGATATATGCCTACATGGCCATATTCATCTTAATAAGACATTGTTGGAAGGGTGGAACATCAGCATGCAGGACATACTTCAGAGGTGCGAGGATGCAATCAACTCACTAGTCCAAAAAAAGAAGAAGAAAGCTGAGGACTTTAAGAAAATGAATTTGTCTGTCAGTGAATGCTGCTCTTTCCGAGGTCCAGGCTCGAGCAAAGATTCTGATATGCCGTGCTTGATGTTTTCCTCCTACAATGCCACTGATCCTGATCTGGAAAGAACTCTGGATGTTCTCTGCAATACAATATATCCAGTTCTGCTCGAAACAGTGATCAAAGGCGATCCACGGATTGCCTCAGCAAATATAATCTGGAATAGTCCAGAAACGACAACCTGGATCCGGAGTCTTCATGCATCCCGCCGAGGAGAATGGGTATTGGATGTCACGGTTGAAAAATCTGATGTCAAGCAAAGTGGTGATGCATGGAGGGTTGTGATTGACTCATGTCTTTCAGTTCTTCATCTGATAGACACAAAGCGGTCAATCCCATATTCCATAAAGCAAGTGCAAGAGCTGCTTGGTTTGTCCTGCGCCTTTGAGCAAGCTGTTCAGCGTCTCTCAGCTTCAGTGAGAAAGGTCTCCAAAGGAGTTCTGAAAGAACATATCATTCTCGTGGCAAACAACATGACCTGTTCAGGGGATATGCTAGGTTTCAATTCTGGAGGTTACAAGGCTTTGACTCGGTCCTTGAACATCAAAGCTCCATTCACAGAAGCAACTCTTATTGCCTTCTTTGGGATTGAAAGTTAG
Protein:  
MEEASSSDILEAEIVGISFALATHRQIRLASISDAGINHASQLSNAFLGLPLEFGKCEACGATEPDKCEGHFGYIHLPVPIYHPAHVSELKQMLSLLCLKCLKIKKIKSTSSGLAERLLGVCCEEASNITIKDKSSDGASYLQLKLPSRTRLQEGFWNFLERYGYRYGSDHTRPLLAREVKEILRRIPEETRKKLTAKGHIPQEGYILEYLPVPPNCLSVPEVSDGSNSMSVDPSRIELKDVLRKVVAINNSRSGETNFESHRAEANEMFRVVDTYLQVRGTAKPTRNIDMRFGVSKISDSSSSKAWTEKMRTLFIRKGSGFSSRSVITGDAFRNVNEVGIPMEIAHRITFEERVSVHNIGYLQELVDNKMCLSYTQGSTTYSLRDGSKGHTVLKPGQIVHRRVMDGDVVFINRPPTTHKHSLQALRVYVHEDNTVKINPLMCSPLSADFDGDCVHLFYPQSLTAKAEVLELFSVDKQLRSSHTGQLILQLGLDSLLSLRVMMEQVFLDKASAQQLAMYGSRSLPPPAVVKSSKSGPAWTFFQILQLAFPERLSCRGDGFIVGGSDLLSFDFGVDALASIINGIVTAIMVEKGPKEALAFFDSLQPLLMEHLDPQGFSLSLEDLSMSREDMGVIHNLIVREISPMVSRLRLSYEDELQLENSIQKVKEVAANFMLKSYSMRNLIDIKSNSAINKLVQQIGFLGLQLSDKKKLYTKTLVEDMAQFYKKKYVSTSSSGDFGIVKGCFFHGLDPYEEMAHSVAAREVIVRSSRGLAEPGTLFKNLMAVLRDIVITNDGTVRNTCSNSIVQFKYELSSDNENQGLFEAGDPVGVLAATAMSNPAYKAVLDSSPNSNSSWELMKEVLLCKVNFQNTTNDRRVILYLNECRCGKKYCQENSAYTVRNKLKKVSLKDTAVEFLVEYRKQQAISEIFGMDICLHGHIHLNKTLLEGWNISMQDILQRCEDAINSLVQKKKKKAEDFKKMNLSVSECCSFRGPGSSKDSDMPCLMFSSYNATDPDLERTLDVLCNTIYPVLLETVIKGDPRIASANIIWNSPETTTWIRSLHASRRGEWVLDVTVEKSDVKQSGDAWRVVIDSCLSVLHLIDTKRSIPYSIKQVQELLGLSCAFEQAVQRLSASVRKVSKGVLKEHIILVANNMTCSGDMLGFNSGGYKALTRSLNIKAPFTEATLIAFFGIES